TY - JOUR
T1 - Description of Streptococcus dentalis sp. nov., Streptococcus gingivalis sp. nov., and Streptococcus lingualis sp. nov., Isolated from Human Oral Cavities
AU - Goo, Beom Jin
AU - Choi, Young Sik
AU - Gim, Do Hun
AU - Jeong, Su Won
AU - Choi, Jee Won
AU - Sung, Hojun
AU - Lee, Jae Yun
AU - Bae, Jin Woo
N1 - Publisher Copyright:
© The Author(s), under exclusive licence to Microbiological Society of Korea 2024.
PY - 2024/11
Y1 - 2024/11
N2 - We isolated three novel strains, S1T, S2T, and S5T, from human oral cavities and identified them as distinct novel species. All these strains are facultatively anaerobic, Gram-stain-positive, and non-flagellated bacteria. Their optimal growth conditions for these strains were observed in Columbia broth (CB) at 37 °C, pH 7.0, and in the absence of NaCl. Phylogenetic analyses, employing the 16S rRNA gene and whole-genome sequencing, confirmed that all three strains belong to the genus Streptococcus. The 16S rRNA gene sequences of strains S1T, S2T, and S5T showed the highest similarities to Streptococcus parasanguinis, 98.57%, 99.05%, and 99.05%, respectively, and the orthologous average nucleotide identity (OrthoANI) values between the three strains and S. parasanguinis were 93.82%, 93.67%, and 94.04%, respectively. The pairwise OrthoANI values between the novel strains were 94.37% (S1T–S2T), 95.03% (S2T–S5T), and 94.71% (S1T–S5T). All strains had C20:1ω9c and summed feature 8 (C18:1ω7c and/or C18:1ω6c) as major cellular fatty acids. Additionally, diphosphatidylglycerol (DPG) and hydroxyphosphatidylethanolamine (OH-PE) were identified as major polar lipids. Menaquinone was undetected in all strains. The results from the phylogenetic, phenotypic, chemotaxonomic, and genotypic analyses collectively indicated that strains S1T, S2T, and S5T represent three distinct novel species within the genus Streptococcus, and we propose the names Streptococcus dentalis sp. nov. for strain S1T (= KCTC 21234T = JCM 36526T), Streptococcus gingivalis sp. nov. for strain S2T (= KCTC 21235T = JCM 36527T), and Streptococcus lingualis sp. nov. for strain S5T (= KCTC 21236T = JCM 36528T).
AB - We isolated three novel strains, S1T, S2T, and S5T, from human oral cavities and identified them as distinct novel species. All these strains are facultatively anaerobic, Gram-stain-positive, and non-flagellated bacteria. Their optimal growth conditions for these strains were observed in Columbia broth (CB) at 37 °C, pH 7.0, and in the absence of NaCl. Phylogenetic analyses, employing the 16S rRNA gene and whole-genome sequencing, confirmed that all three strains belong to the genus Streptococcus. The 16S rRNA gene sequences of strains S1T, S2T, and S5T showed the highest similarities to Streptococcus parasanguinis, 98.57%, 99.05%, and 99.05%, respectively, and the orthologous average nucleotide identity (OrthoANI) values between the three strains and S. parasanguinis were 93.82%, 93.67%, and 94.04%, respectively. The pairwise OrthoANI values between the novel strains were 94.37% (S1T–S2T), 95.03% (S2T–S5T), and 94.71% (S1T–S5T). All strains had C20:1ω9c and summed feature 8 (C18:1ω7c and/or C18:1ω6c) as major cellular fatty acids. Additionally, diphosphatidylglycerol (DPG) and hydroxyphosphatidylethanolamine (OH-PE) were identified as major polar lipids. Menaquinone was undetected in all strains. The results from the phylogenetic, phenotypic, chemotaxonomic, and genotypic analyses collectively indicated that strains S1T, S2T, and S5T represent three distinct novel species within the genus Streptococcus, and we propose the names Streptococcus dentalis sp. nov. for strain S1T (= KCTC 21234T = JCM 36526T), Streptococcus gingivalis sp. nov. for strain S2T (= KCTC 21235T = JCM 36527T), and Streptococcus lingualis sp. nov. for strain S5T (= KCTC 21236T = JCM 36528T).
KW - Oral microbiome
KW - Oral microbiota
KW - Streptococcaceae
KW - Streptococcus dentalis
KW - Streptococcus gingivalis
KW - Streptococcus lingualis
UR - http://www.scopus.com/inward/record.url?scp=85208958234&partnerID=8YFLogxK
U2 - 10.1007/s12275-024-00178-1
DO - 10.1007/s12275-024-00178-1
M3 - Article
C2 - 39531154
AN - SCOPUS:85208958234
SN - 1225-8873
VL - 62
SP - 973
EP - 983
JO - Journal of Microbiology
JF - Journal of Microbiology
IS - 11
ER -