TY - JOUR
T1 - Haladaptatus cibarius sp. nov., an extremely halophilic archaeon from seafood, and emended description of the genus Haladaptatus
AU - Roh, Seong Woon
AU - Lee, Myung Lip
AU - Bae, Jin Woo
PY - 2010/5
Y1 - 2010/5
N2 - A novel, extremely halophilic archaeon, D43T, was isolated from traditional salt-fermented seafood in Korea. The cells were Gram-negative- staining and motile. The strain grew at 15-50 °C, 10-30% (w/v) NaCl and pH 6.0-8.0. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain D43T is affiliated with the family Halobacteriaceae in the domain Archaea and had 95.5% 16S rRNA gene sequence similarity with Haladaptatus paucihalophilus DX253T. The sequence from strain D43T formed a clade with those from Hap. paucihalophilus regardless of which tree-generating algorithm was used. DNA-DNA hybridization experiments showed 25.8% relatedness between the isolate and Hap. paucihalophilus KCTC 4006 T. Major lipids were phosphatidylglycerol, phosphatidylglycerol phosphate methyl ester and two unidentified glycolipids. The DNA G+C content of the isolate was 56.5 mol%. On the basis of this polyphasic taxonomic study, strain D43T represents a novel species in the genus Haladaptatus, for which the name Haladaptatus cibarius sp. nov. is proposed. The type strain is D43T (=DSM 19505T =JCM 15962T).
AB - A novel, extremely halophilic archaeon, D43T, was isolated from traditional salt-fermented seafood in Korea. The cells were Gram-negative- staining and motile. The strain grew at 15-50 °C, 10-30% (w/v) NaCl and pH 6.0-8.0. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain D43T is affiliated with the family Halobacteriaceae in the domain Archaea and had 95.5% 16S rRNA gene sequence similarity with Haladaptatus paucihalophilus DX253T. The sequence from strain D43T formed a clade with those from Hap. paucihalophilus regardless of which tree-generating algorithm was used. DNA-DNA hybridization experiments showed 25.8% relatedness between the isolate and Hap. paucihalophilus KCTC 4006 T. Major lipids were phosphatidylglycerol, phosphatidylglycerol phosphate methyl ester and two unidentified glycolipids. The DNA G+C content of the isolate was 56.5 mol%. On the basis of this polyphasic taxonomic study, strain D43T represents a novel species in the genus Haladaptatus, for which the name Haladaptatus cibarius sp. nov. is proposed. The type strain is D43T (=DSM 19505T =JCM 15962T).
UR - http://www.scopus.com/inward/record.url?scp=77952730475&partnerID=8YFLogxK
U2 - 10.1099/ijs.0.013037-0
DO - 10.1099/ijs.0.013037-0
M3 - Article
C2 - 19667394
AN - SCOPUS:77952730475
SN - 1466-5026
VL - 60
SP - 1187
EP - 1190
JO - International Journal of Systematic and Evolutionary Microbiology
JF - International Journal of Systematic and Evolutionary Microbiology
IS - 5
ER -