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Kistimonas scapharcae sp. nov., isolated from a dead ark clam (Scapharca broughtonii), and emended description of the genus Kistimonas

  • Jina Lee
  • , Na Ri Shin
  • , Hae Won Lee
  • , Seong Woon Roh
  • , Min Soo Kim
  • , Young Ok Kim
  • , Jin Woo Bae

Research output: Contribution to journalArticlepeer-review

19 Citations (Scopus)

Abstract

A Gram-negative, motile, facultatively anaerobic rod, designated A36T, was isolated from a dead ark clam found on the south coast of Korea. The isolate was catalase- and oxidase-negative. 16S rRNA gene sequence analysis indicated that strain A36T was most closely related to Kistimonas asteriae KMD 001T, with which it shared 98.2 % 16S rRNA gene sequence similarity. Strain A36T grew optimally at 30-37 °C, with 1 % (w/v) NaCl and at pH 8.0. The major respiratory quinone was ubiquinone-9 (Q-9). The major polar lipids were phosphatidylserine, phosphoethanolamine, phosphatidylglycerol and diphosphatidylglycerol. The major fatty acids were summed feature 3 (comprising C16: 1ω7c and/or iso-C15 2-OH) and C16: 0. The genomic DNA G+C content was 47.3 mol%. DNA-DNA relatedness between the isolate and K. asteriae JCM 15607T was <25±3 %. Strain A36T represents a novel species of the genus Kistimonas, for which the name Kistimonas scapharcae sp. nov. is proposed. The type strain is A36T (= KACC 16204T = JCM 17805T). An emended description of the genus Kistimonas is also provided.

Original languageEnglish
Pages (from-to)2865-2869
Number of pages5
JournalInternational Journal of Systematic and Evolutionary Microbiology
Volume62
Issue number12
DOIs
Publication statusPublished - 2012

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