Skip to main navigation Skip to search Skip to main content

KU-DMIS at BioASQ 9: Data-centric and model-centric approaches for biomedical question answering

  • Wonjin Yoon
  • , Jaehyo Yoo
  • , Sumin Seo
  • , Mujeen Sung
  • , Minbyul Jeong
  • , Gangwoo Kim
  • , Jaewoo Kang

Research output: Contribution to journalConference articlepeer-review

4 Citations (Scopus)

Abstract

In this paper, we present approaches for our participation in the 9th BioASQ challenge (Task b - Phase B). Our systems are based on the transformer models with model-centric and data-centric approaches. For factoid-type questions we modified the dataset to increase label consistency, and for list-type questions we apply the sequence tagging model which is a more natural model design for the multi-label task. Our experimental results suggest two main points: better model design can be achieved by reflecting data characteristics such as the number of labels for a data point; and scarce resources such as BioQA datasets can greatly benefit from a data-centric approach with relatively little effort. Our submissions achieve competitive results with top or near top performance in the challenge.

Original languageEnglish
Pages (from-to)351-359
Number of pages9
JournalCEUR Workshop Proceedings
Volume2936
Publication statusPublished - 2021
Event22nd Working Notes of CLEF - Conference and Labs of the Evaluation Forum, CLEF-WN 2021 - Virtual, Online, Romania
Duration: 21 Sept 202124 Sept 2021

Bibliographical note

Publisher Copyright:
© 2021 Copyright for this paper by its authors. Use permitted under Creative Commons License Attribution 4.0 International (CC BY 4.0).

Keywords

  • BioASQ
  • BioNLP
  • Biomedical natural language processing
  • Biomedical question answering

Fingerprint

Dive into the research topics of 'KU-DMIS at BioASQ 9: Data-centric and model-centric approaches for biomedical question answering'. Together they form a unique fingerprint.

Cite this