TY - JOUR
T1 - Lysobacter novalis sp. nov., isolated from fallow farmland soil
AU - Singh, Hina
AU - Du, Juan
AU - Won, Kyung Hwa
AU - Yang, Jung Eun
AU - Akter, Shahina
AU - Kim, Ki Young
AU - Yi, Tae Hoo
N1 - Publisher Copyright:
© 2015 IUMS.
PY - 2015/9
Y1 - 2015/9
N2 - A novel bacterial strain, designated THG-PC7T, was isolated from fallow farmland soil in Yongin, South Korea. Cells of strain THG-PC7T were Gram-stain-negative, dark yellow, aerobic, rod-shaped and had gliding motility. Strain THG-PC7T grew optimally at 25–35°C, at pH7 and in the absence of NaCl. Comparative 16S rRNA gene sequence analysis identified strain THG-PC7T as belonging to the genus Lysobacter, exhibiting highest sequence similarity withLysobacter ximonensis KCTC 22336T (98.7%) followed by Lysobacter niastensis KACC 11588T(95.7%). In DNA–DNA hybridization tests, DNA relatedness between strain THG-PC7T and its closest phylogenetic neighbour L. ximonensis was below 25%. The DNA G+C content of the novel isolate was determined to be 62.5mol%. Flexirubin-type pigments were found to be present. The major cellular fatty acids were determined to be iso-C15:0, iso-C16:0, anteiso-C15:0 and iso-C17:1ω9c. The major respiratory quinone was identified as ubiquonone-8 (Q8). The predominant polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and an unidentified aminophospolipid. On the basis of results from DNA–DNA hybridization and the polyphasic data, strain THG-PC7T represents a novel species of the genus Lysobacter, for which the name Lysobacter novalis sp. nov. is proposed. The type strain is THG-PC7T(=KACC 18276T=CCTCC AB 2014319T).
AB - A novel bacterial strain, designated THG-PC7T, was isolated from fallow farmland soil in Yongin, South Korea. Cells of strain THG-PC7T were Gram-stain-negative, dark yellow, aerobic, rod-shaped and had gliding motility. Strain THG-PC7T grew optimally at 25–35°C, at pH7 and in the absence of NaCl. Comparative 16S rRNA gene sequence analysis identified strain THG-PC7T as belonging to the genus Lysobacter, exhibiting highest sequence similarity withLysobacter ximonensis KCTC 22336T (98.7%) followed by Lysobacter niastensis KACC 11588T(95.7%). In DNA–DNA hybridization tests, DNA relatedness between strain THG-PC7T and its closest phylogenetic neighbour L. ximonensis was below 25%. The DNA G+C content of the novel isolate was determined to be 62.5mol%. Flexirubin-type pigments were found to be present. The major cellular fatty acids were determined to be iso-C15:0, iso-C16:0, anteiso-C15:0 and iso-C17:1ω9c. The major respiratory quinone was identified as ubiquonone-8 (Q8). The predominant polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and an unidentified aminophospolipid. On the basis of results from DNA–DNA hybridization and the polyphasic data, strain THG-PC7T represents a novel species of the genus Lysobacter, for which the name Lysobacter novalis sp. nov. is proposed. The type strain is THG-PC7T(=KACC 18276T=CCTCC AB 2014319T).
UR - http://www.scopus.com/inward/record.url?scp=84943554490&partnerID=8YFLogxK
U2 - 10.1099/ijsem.0.000389
DO - 10.1099/ijsem.0.000389
M3 - Article
C2 - 26296792
AN - SCOPUS:84943554490
SN - 1466-5026
VL - 65
SP - 3131
EP - 3136
JO - International Journal of Systematic and Evolutionary Microbiology
JF - International Journal of Systematic and Evolutionary Microbiology
IS - 9
ER -