Lysobacter novalis sp. nov., isolated from fallow farmland soil

Hina Singh, Juan Du, Kyung Hwa Won, Jung Eun Yang, Shahina Akter, Ki Young Kim, Tae Hoo Yi

Research output: Contribution to journalArticlepeer-review

9 Citations (Scopus)

Abstract

A novel bacterial strain, designated THG-PC7T, was isolated from fallow farmland soil in Yongin, South Korea. Cells of strain THG-PC7T were Gram-stain-negative, dark yellow, aerobic, rod-shaped and had gliding motility. Strain THG-PC7T grew optimally at 25–35°C, at pH7 and in the absence of NaCl. Comparative 16S rRNA gene sequence analysis identified strain THG-PC7T as belonging to the genus Lysobacter, exhibiting highest sequence similarity withLysobacter ximonensis KCTC 22336T (98.7%) followed by Lysobacter niastensis KACC 11588T(95.7%). In DNA–DNA hybridization tests, DNA relatedness between strain THG-PC7T and its closest phylogenetic neighbour L. ximonensis was below 25%. The DNA G+C content of the novel isolate was determined to be 62.5mol%. Flexirubin-type pigments were found to be present. The major cellular fatty acids were determined to be iso-C15:0, iso-C16:0, anteiso-C15:0 and iso-C17:1ω9c. The major respiratory quinone was identified as ubiquonone-8 (Q8). The predominant polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and an unidentified aminophospolipid. On the basis of results from DNA–DNA hybridization and the polyphasic data, strain THG-PC7T represents a novel species of the genus Lysobacter, for which the name Lysobacter novalis sp. nov. is proposed. The type strain is THG-PC7T(=KACC 18276T=CCTCC AB 2014319T).

Original languageEnglish
Pages (from-to)3131-3136
Number of pages6
JournalInternational Journal of Systematic and Evolutionary Microbiology
Volume65
Issue number9
DOIs
Publication statusPublished - Sept 2015

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