TY - JOUR
T1 - Lysobacter terrae sp. Nov. isolated from Aglaia odorata rhizosphere soil
AU - Ngo, Hien T.T.
AU - Won, Kyunghwa
AU - Du, Juan
AU - Son, Heung Min
AU - Park, Yongjin
AU - Kook, Moochang
AU - Kim, Ki Young
AU - Jin, Feng Xie
AU - Yi, Tae Hoo
N1 - Publisher Copyright:
©2015 IUMS.
PY - 2015
Y1 - 2015
N2 - A Gram-stain negative, facultatively anaerobic, non-motile, rod-shaped bacterium, designated strain THG-A13T, was isolated from Aglaia odorata rhizosphere soil in Gyeonggi-do, Republic of Korea. Based on 16S rRNA gene sequence comparisons, strain THG-A13T had close similarity with Lysobacter niabensis GH34-4T (98.5%), Lysobacter oryzae YC6269T (97.9%) and Lysobacter yangpyeongensis GH19-3T (97.3%). Chemotaxonomic data revealed that strain THG-A13T possesses ubiquinone-8 (Q8) as the predominant isoprenoid quinone and iso-C15:0, iso-C16:0 and iso-C17:1v9c as the major fatty acids. The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol) and diphosphatidylglycerol. The G+C content was 66.3 mol%. The DNA–DNA relatedness values between strain THG-A13T and its closest phylogenetic neighbours were below 18.0%. These data corroborated the affiliation of strain THG-A13T to the genus Lysobacter. These data suggest that the isolate represents a novel species for which the name Lysobacter terrae sp. nov. is proposed, with THG-A13T as the type strain (5KACC 17646T5JCM 19613T).
AB - A Gram-stain negative, facultatively anaerobic, non-motile, rod-shaped bacterium, designated strain THG-A13T, was isolated from Aglaia odorata rhizosphere soil in Gyeonggi-do, Republic of Korea. Based on 16S rRNA gene sequence comparisons, strain THG-A13T had close similarity with Lysobacter niabensis GH34-4T (98.5%), Lysobacter oryzae YC6269T (97.9%) and Lysobacter yangpyeongensis GH19-3T (97.3%). Chemotaxonomic data revealed that strain THG-A13T possesses ubiquinone-8 (Q8) as the predominant isoprenoid quinone and iso-C15:0, iso-C16:0 and iso-C17:1v9c as the major fatty acids. The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol) and diphosphatidylglycerol. The G+C content was 66.3 mol%. The DNA–DNA relatedness values between strain THG-A13T and its closest phylogenetic neighbours were below 18.0%. These data corroborated the affiliation of strain THG-A13T to the genus Lysobacter. These data suggest that the isolate represents a novel species for which the name Lysobacter terrae sp. nov. is proposed, with THG-A13T as the type strain (5KACC 17646T5JCM 19613T).
UR - http://www.scopus.com/inward/record.url?scp=84927171815&partnerID=8YFLogxK
U2 - 10.1099/ijs.0.067397-0
DO - 10.1099/ijs.0.067397-0
M3 - Article
C2 - 25406233
AN - SCOPUS:84927171815
SN - 1466-5026
VL - 65
SP - 587
EP - 592
JO - International Journal of Systematic and Evolutionary Microbiology
JF - International Journal of Systematic and Evolutionary Microbiology
IS - 2
ER -