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Sphingomonas panaciterrae sp. nov. a plant growth-promoting bacterium isolated from soil of a ginseng field

  • Johan Sukweenadhi
  • , Yeon Ju Kim
  • , Chang Ho Kang
  • , Mohamed El Agamy Farh
  • , Ngoc Lan Nguyen
  • , Van An Hoang
  • , Eul Su Choi
  • , Deok Chun Yang

Research output: Contribution to journal › Article › peer-review

22 Citations (Scopus)

Abstract

Strain DCY91T, a Gram-stain-negative, rod-shaped, aerobic, non-motile bacterium, was isolated from soil of ginseng field in Gyeonggi province, South Korea. Strain DCY91T shared the highest 16S rRNA gene sequence similarity with Sphingomonas mucosissima DSM 17494T (98.55 %), Sphingomonas dokdonensis KACC 17420T (98.11 %) and Sphingomonas xinjiangensis DSM 26736T (96.68 %). The strain DCY91T was found to able to grow best in trypticase soy agar at 28 °C, at pH 7 and at 0.5 % NaCl. Ubiquinone 10 was identified as the isoprenoid quinone. The major polar lipids were identified as sphingoglycolipid, diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and phosphatidylcholine. The major fatty acids of strain DCY91T were identified as unsaturated C18:1ω7c and saturated C16:0. The major polyamine content was sym-homospermidine. The DNA G + C content was determined to be 65.8 mol% (HPLC). After 6 days of incubation, strain DCY91T produced 9.64 ± 1.73 and 33.73 ± 4.66 µg/ml indole-3-acetic acid, using media without l-tryptophan and supplemented with l-tryptophan, respectively. Strain DCY91T was also weakly solubilized phosphate and produced siderophores. On the basis of the phenotypic characteristics, genotypic analysis and chemotaxonomic characteristics, strain DCY91T is considered to represent a novel species of the genus Sphingomonas, for which the name Sphingomonas panaciterrae sp. nov. is proposed. The type strain is DCY91T (=KCTC 42346T =JCM 30807T).

Original languageEnglish
Pages (from-to)973-981
Number of pages9
JournalArchives of Microbiology
Volume197
Issue number8
DOIs
Publication statusPublished - 13 Oct 2015

Bibliographical note

Publisher Copyright:
© 2015, Springer-Verlag Berlin Heidelberg.

Keywords

  • Ginseng soil
  • IAA producer
  • Sphingomonas panaciterrae

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