Tabrizicola piscis sp. Nov., isolated from the intestinal tract of a korean indigenous freshwater fish, acheilognathus koreensis

Jeong Eun Han, Woorim Kang, June Young Lee, Hojun Sung, Dong Wook Hyun, Hyun Sik Kim, Pil Soo Kim, Euon Jung Tak, Yun Seok Jeong, Jae Yun Lee, So Yeon Lee, Ji Hyun Yun, Mi Ja Jung, Na Ri Shin, Tae Woong Whon, Myung Suk Kang, Ki Eun Lee, Byoung Hee Lee, Jin Woo Bae

Research output: Contribution to journalArticlepeer-review

11 Citations (Scopus)

Abstract

A novel Gram-negative, obligately aerobic, rod-shaped and non-motile bacterium, designated strain K13M18T, was isolated from the intestinal tract of a Korean indigenous fish, oily bitterling (Acheilognathus koreensis). Strain K13M18T formed creamy-pink colonies on a marine agar plate. Results of phylogenetic analysis based on the 16S rRNA gene sequence similarity indi-cated that strain K13M18T was most closely related to Tabrizicola sediminis DRYC-M-16T, sharing 97.62 % similarity with that strain. Strain K13M18T belonged to the genus Tabrizicola, which formed a cluster with Tabrizicola aquatica RCRI19T, Tabrizicola fusiformis SY72T, Tabrizicola sediminis DRYC-M-16T and Tabrizicola alkalilacus DJCT in a phylogenetic tree based on the 16S rRNA gene sequences. Strain K13M18T grown optimally in 0 % (w/v) NaCl, at pH 7 and 30 °C, in a marine broth medium. The predominant cellular fatty acids were C18: 1 ω7c and C18: 1 ω6c. The major respiratory isoprenoid quinone was ubiquinone Q-10. Polar lipids of strain K13M18T contained phosphatidylcholine, phosphatidylglycerol, phosphatidylinositol, diphosphatidylglyc-erol, six unidentified aminophospholipids, one unidentified aminolipid and an unidentified lipid. Based on genome sequencing, the DNA G+C content of strain K13M18T was 64.08 mol %, with an average nucleotide identity value, calculated by a comparative genomic analysis of strains K13M18T and T. sediminis DRYC-M-16T, of 74.82 %. Based on the phylogenetic, genotypic, and phenotypic information, strain K13M18T is proposed to be a novel species of the genus Tabrizicola. The type strain is K13M18T (=KCTC 62659T=JCM 33230T).

Original languageEnglish
Pages (from-to)2305-2311
Number of pages7
JournalInternational Journal of Systematic and Evolutionary Microbiology
Volume70
Issue number4
DOIs
Publication statusPublished - 2020

Bibliographical note

Publisher Copyright:
© 2020 The Authors.

Keywords

  • Acheilognathus koreensis
  • Gut microbiota
  • Korean indigenous freshwater fish
  • Tabrizicola piscis

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